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screed - short read sequence utils¶

Copyright:2008-2012 Michigan State University
Authors:Alex Nolley, C. Titus Brown
Contact:ctb@msu.edu
License:BSD

Contents:

  • Basic Documentation
    • Notes on this document
    • Introduction
    • Getting Going
    • Quick-Start
    • Reading databases
    • Writing Custom Sequence Parsers
    • File formats as understood by screed
    • FASTA <-> FASTQ Conversion
  • screed examples
    • Basic Usage
  • The screed developer documentation
    • Coding guidelines and code review checklist
    • Release Documentation
  • Release notes for past versions of screed
    • Release v0.5
    • Release v0.8
  • Known Issues
    • List of known issues
  • Contributor Code of Conduct
  • License

Indices and tables¶

  • Index
  • Module Index
  • Search Page

Table Of Contents

  • screed - short read sequence utils
  • Indices and tables

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